@Book{bookagresti2002,
  author =       {Alan Agresti},
  title =        {Categorical Data Analysis},
  year =         2002,
  edition =      {2nd},
  publisher =    {John Wiley \& Sons},
  address =      {Hoboken, New Jersey}
}

@Article{Agresti:2002,
  author =       {Agresti, A and Coull, BA},
  title =        {The analysis of contingency tables under inequality
                  constraints},
  journal =      {Journal of Statistical Planning and Inference},
  year =         2002,
  volume =       107,
  pages =        {45--73},
  number =       {1--2}
}

@Article{Armitage:1955,
  author =       {Armitage, P},
  title =        {Tests for Linear Trends in Proportions and Frequencies},
  journal =      {Biometrics},
  year =         1955,
  volume =       11,
  pages =        {375--386},
  number =       3
}

@Article{Bagos2007,
  author =       {Bagos, PG and Nikolopoulos, GK},
  title =        {A method for meta-analysis of case-control genetic association
                  studies using logistic regression},
  journal =      {Statistical Applications in Genetics and Molecular Biology},
  year =         2007,
  volume =       6,
  pages =        17,
  owner =        {hothorn},
  timestamp =    {2008.07.10}
}

@Article{Freidlin:2002,
  author =       {Freidlin, B and Zheng, G and Li, ZH and Gastwirth, JL},
  title =        {Trend tests for case-control studies of genetic markers:
                  {P}ower, sample size and robustness},
  journal =      {Human Heredity},
  year =         2002,
  volume =       53,
  pages =        {146--152},
  number =       3
}

@Manual{PKG:coin,
  title =        {coin: Conditional Inference Procedures in a Permutation Test
                  Framework},
  author =       {T. Hothorn and K. Hornik and M. A. van de Wiel and A. Zeileis},
  year =         2009,
  note =         {\RR{} package version 1.0-2},
  url =          {http://CRAN.R-project.org/package=coin}
}

@Article{Hothorn:2006:AmStat,
  author =       {T. Hothorn and K. Hornik and M. A. van de Wiel and A. Zeileis},
  title =        {A {L}ego System for Conditional Inference},
  journal =      {The American Statistician},
  year =         2006,
  volume =       60,
  pages =        {257--263},
  number =       3,
  doi =          {10.1198/000313006X118430}
}

@Article{Kavvoura2008,
  author =       {Kavvoura, F. K. and Ioannidis, J. P. A.},
  title =        {Methods for meta-analysis in genetic association studies: a
                  review of their potential and pitfalls},
  journal =      {Human Genetics},
  year =         2008,
  volume =       123,
  pages =        {1--14},
  number =       1,
  month =        feb,
  af =           {Kavvoura, Fotini K.EOLEOLIoannidis, John P. A.},
  owner =        {hothorn},
  sn =           {0340-6717},
  timestamp =    {2008.04.21},
  ut =           {ISI:000252799200001}
}

@Article{Neuhauser:2002,
  author =       {Neuh{\"a}user, M},
  title =        {Exact tests for the analysis of case-control studies of
                  genetic markers},
  journal =      {Human Heredity},
  year =         2002,
  volume =       54,
  pages =        {151--156},
  number =       3
}

@Manual{rcore2007,
  title =        {\textsf{R}: A Language and Environment for Statistical
                  Computing},
  author =       {{R Development Core Team}},
  organization = {R Foundation for Statistical Computing},
  address =      {Vienna, Austria},
  year =         2009,
  note =         {{ISBN} 3-900051-00-3},
  url =          {http://www.R-project.org}
}

@Article{Reich:2002,
  author =       {K Reich and R M{\"o}ssner and I R K{\"o}nig and G Westphal and
                  A Ziegler and C Neumann},
  title =        {Promoter Polymorphisms of the Genes Encoding Tumor Necrosis
                  Factor-$\alpha$ and Interleukin-1$\beta$ are Associated with
                  Different Subtypes of Psoriasis Characterized by Early and
                  Late Disease Onset},
  journal =      {The Journal of Investigative Dermatology},
  year =         2002,
  volume =       118,
  pages =        {155--163},
  number =       1
}

@Article{Salanti2008,
  author =       {Salanti, G. and Higgins, J. P. T.},
  title =        {Meta-analysis of genetic association studies under different
                  inheritance models using data reported as merged genotypes},
  journal =      {Statistics in Medicine},
  year =         2008,
  volume =       27,
  pages =        {764--777},
  number =       5,
  month =        feb,
  af =           {Salanti, GeorgiaEOLEOLHiggins, Julian P. T.},
  owner =        {hothorn},
  sn =           {0277-6715},
  timestamp =    {2008.04.21},
  ut =           {ISI:000253782500009}
}

@Article{Sasieni:1997,
  author =       {Sasieni, PD},
  title =        {From genotypes to genes: {D}oubling the sample size},
  journal =      {Biometrics},
  year =         1997,
  volume =       53,
  pages =        {1253--1261},
  number =       4
}

@Article{Schunkert2008,
  author =       {Schunkert, H. and Gotz, A. and Braund, P. and McGinnis, R. and
                  Tregouet, D. A. and Mangino, M. and Linsel-Nitschke, P. and
                  Cambien, F. and Hengstenberg, C. and Stark, K. and
                  Blankenberg, S. and Tiret, L.  and Ducimetiere, P. and Keniry,
                  A. and Ghori, M. J. R. and Schreiber, S. and El Mokhtari,
                  N. E. and Hall, A. S. and Dixon, R. J. and Goodall, A. H. and
                  Liptau, H. and Pollard, H. and Schwarz, D. F. and Hothorn,
                  L. A. and Wichmann, H. E. and Konig, I. R. and Fischer, M. and
                  Meisinger, C. and Ouwehand, W. and Deloukas, P. and Thompson,
                  J. R. and Erdmann, J. and Ziegler, A. and Samani, N. J.},
  title =        {Repeated replication and a prospective meta-analysis of the
                  association between chromosome 9p21.3 and coronary artery
                  disease},
  journal =      {Circulation},
  year =         2008,
  volume =       117,
  pages =        {1675--1684},
  number =       13,
  month =        apr,
  af =           {Schunkert, HeribertEOLEOLGoetz, AnikaEOLEOLBraund,
                  PeterEOLEOLMcGinnis, RalphEOLEOLTregouet,
                  David-AlexandreEOLEOLMangino, MassimoEOLEOLLinsel-Nitschke,
                  PatrickEOLEOLCambien, FrancoisEOLEOLHengstenberg,
                  ChristianEOLEOLStark, KlausEOLEOLBlankenberg,
                  StefanEOLEOLTiret, LaurenceEOLEOLDucimetiere,
                  PierreEOLEOLKeniry, AndrewEOLEOLGhori, Mohammed
                  J. R.EOLEOLSchreiber, StefanEOLEOLEl Mokhtari, Nour
                  EddineEOLEOLHall, Alistair S.EOLEOLDixon, Richard
                  J.EOLEOLGoodall, Alison H.EOLEOLLiptau, HenrikeEOLEOLPollard,
                  HelenEOLEOLSchwarz, Daniel F.EOLEOLHothorn, Ludwig
                  A.EOLEOLWichmann, H. -ErichEOLEOLKoenig, Inke R.EOLEOLFischer,
                  MarcusEOLEOLMeisinger, ChristaEOLEOLOuwehand,
                  WillemEOLEOLDeloukas, PanosEOLEOLThompson, John
                  R.EOLEOLErdmann, JeanetteEOLEOLZiegler, AndreasEOLEOLSamani,
                  Nilesh J.},
  ca =           {Cardiogen Consortium},
  owner =        {hothorn},
  sn =           {0009-7322},
  timestamp =    {2008.04.21},
  ut =           {ISI:000254576500008}
}

@Article{Shahbazi:2002,
  author =       {Shahbazi, M and Pravica, V and Nasreen, N and Fakhoury, H and
                  Fryer, AA and Strange, RC and Hutchinson, PE and Osborne, JE
                  and Lear, JT and Smith, AG and Hutchinson, IV},
  title =        {Association between functional polymorphism in {EGF} gene and
                  malignant melanoma},
  journal =      {The Lancet},
  year =         2002,
  volume =       359,
  pages =        {397--401},
  number =       9304
}

@Article{Slager:2001,
  author =       {Slager, SL and Schaid, DJ},
  title =        {Case-control studies of genetic markers: {P}ower and sample
                  size approximations for {A}rmitage's test for trend},
  journal =      {Human Heredity},
  year =         2001,
  volume =       52,
  pages =        {149--153},
  number =       3
}

@Article{StrasserWeber1999,
  author =       {H Strasser and Ch Weber},
  title =        {On the asymptotic theory of permutation statistics},
  journal =      {Mathematical Methods of Statistics},
  year =         1999,
  volume =       8,
  pages =        {220-250},
  key =          448
}

@Book{WestfallYoung1993,
  title =        {Resampling-based Multiple Testing},
  publisher =    {John Wiley \& Sons},
  year =         1993,
  author =       {PH Westfall and SS Young},
  address =      {New York},
  key =          463
}

@Article{Zang:2007,
  author =       {Y Zang and H Zhang and YN Yang and G Zheng},
  title =        {Robust genomic control and robust delta centralization tests
                  for case-control association studies},
  journal =      {Human Heredity},
  year =         2007,
  volume =       63,
  pages =        {187--195},
  number =       {3--4}
}

@Article{Zheng:2006,
  author =       {Zheng, G and Freidlin, B and Gastwirth, JL},
  title =        {Robust genomic control for association studies},
  journal =      {American Journal of Human Genetics},
  year =         2006,
  volume =       78,
  pages =        {350--356},
  number =       2
}

@Article{Zheng:2005,
  author =       {Zheng, G and Freidlin, B and Li, ZH and Gastwirth, JL},
  title =        {Genomic control for association studies under various genetic
                  models},
  journal =      Biometrics,
  year =         2005,
  volume =       61,
  pages =        {186--192},
  number =       1
}

@Article{Zheng:2003,
  author =       {Zheng, G and Freidlin, B and Li, ZH and Gastwirth, JL},
  title =        {Choice of scores in trend tests for case-control studies of
                  candidate-gene associations},
  journal =      {Biometrical Journal},
  year =         2003,
  volume =       45,
  pages =        {335--348},
  number =       3
}

@Article{Ziegler2008,
  author =       {Ziegler, A. and Koenig, IR. and Thompson, JR.},
  title =        {Biostatistical aspects of genome-wide association studies},
  journal =      {Biometrical Journal},
  year =         2008,
  volume =       50,
  pages =        {8--28},
  owner =        {hothorn},
  timestamp =    {2008.07.10}
}

@Article{Zintzaras2008,
  author =       {Zintzaras, E. and Lau, J.},
  title =        {Trends in meta-analysis of genetic association studies},
  journal =      {Journal of Human Genetics},
  year =         2008,
  volume =       53,
  pages =        {1--9},
  number =       1,
  month =        jan,
  af =           {Zintzaras, EliasEOLEOLLau, Joseph},
  owner =        {hothorn},
  sn =           {1434-5161},
  timestamp =    {2008.04.21},
  ut =           {ISI:000251827900001}
}

@Article{Zheng:2008,
  author =       {Gang Zheng},
  title =        {Analysis of Ordered Categorical Data: {T}wo Score-Independent
                  Approaches},
  journal =      {Biometrics},
  year =         2008,
  volume =       64,
  number =       4,
  pages =        {1276--1279}
}

@Article{Hothorn+Hornik+VanDeWiel:2008,
  author =       {Torsten Hothorn and Kurt Hornik and Mark A. van de Wiel and
                  Achim Zeileis},
  title =        {Implementing a Class of Permutation Tests: The \textbf{coin}
                  Package},
  year =         2008,
  journal =      {Journal of Statistical Software},
  volume =       28,
  number =       8,
  pages =        {1--23},
  doi =          {10.18637/jss.v028.i08}
}

@Article{Gastwirth:1985,
  author =       {J. L. Gastwirth},
  year =         1985,
  title =        {The Use of Maximin Efficiency Robust Tests in Combining
                  Contingency Tables and Survival Analysis},
  journal =      {Journal of the American Statistical Association},
  volume =       80,
  number =       390,
  pages =        {380--384}
}

@Article{Freidlin+Podgor+Gastwirth:1999,
  Author =       {Freidlin, B and Podgor, MJ and Gastwirth, JL},
  Title =        {Efficiency Robust Tests for Survival or Ordered Categorical
                  Data},
  Journal =      {Biometrics},
  Year =         1999,
  Volume =       55,
  Number =       3,
  Pages =        {883--886},
}
