HISTORY.rst
LICENSE
MANIFEST.in
README.rst
dev-requirements.txt
pyproject.toml
setup.cfg
galaxy/__init__.py
galaxy/py.typed
galaxy/tool_util/__init__.py
galaxy/tool_util/edam_util.py
galaxy/tool_util/fetcher.py
galaxy/tool_util/lint.py
galaxy/tool_util/loader.py
galaxy/tool_util/loader_directory.py
galaxy/tool_util/model_factory.py
galaxy/tool_util/output_checker.py
galaxy/tool_util/provided_metadata.py
galaxy/tool_util/validate_test_format.py
galaxy/tool_util/version.py
galaxy/tool_util/biotools/__init__.py
galaxy/tool_util/biotools/interface.py
galaxy/tool_util/biotools/source.py
galaxy/tool_util/client/__init__.py
galaxy/tool_util/client/landing.py
galaxy/tool_util/client/staging.py
galaxy/tool_util/cwl/__init__.py
galaxy/tool_util/cwl/cwltool_deps.py
galaxy/tool_util/cwl/parser.py
galaxy/tool_util/cwl/representation.py
galaxy/tool_util/cwl/runnable.py
galaxy/tool_util/cwl/runtime_actions.py
galaxy/tool_util/cwl/schema.py
galaxy/tool_util/cwl/util.py
galaxy/tool_util/data/__init__.py
galaxy/tool_util/data/_schema.py
galaxy/tool_util/data/bundles/__init__.py
galaxy/tool_util/data/bundles/models.py
galaxy/tool_util/deps/__init__.py
galaxy/tool_util/deps/brew_exts.py
galaxy/tool_util/deps/brew_util.py
galaxy/tool_util/deps/commands.py
galaxy/tool_util/deps/conda_compat.py
galaxy/tool_util/deps/conda_util.py
galaxy/tool_util/deps/container_classes.py
galaxy/tool_util/deps/container_volumes.py
galaxy/tool_util/deps/containers.py
galaxy/tool_util/deps/dependencies.py
galaxy/tool_util/deps/docker_util.py
galaxy/tool_util/deps/dockerfiles.py
galaxy/tool_util/deps/installable.py
galaxy/tool_util/deps/requirements.py
galaxy/tool_util/deps/singularity_util.py
galaxy/tool_util/deps/views.py
galaxy/tool_util/deps/container_resolvers/__init__.py
galaxy/tool_util/deps/container_resolvers/explicit.py
galaxy/tool_util/deps/container_resolvers/mulled.py
galaxy/tool_util/deps/container_resolvers/test.py
galaxy/tool_util/deps/mulled/__init__.py
galaxy/tool_util/deps/mulled/_cli.py
galaxy/tool_util/deps/mulled/get_tests.py
galaxy/tool_util/deps/mulled/invfile.lua
galaxy/tool_util/deps/mulled/mulled_build.py
galaxy/tool_util/deps/mulled/mulled_build_channel.py
galaxy/tool_util/deps/mulled/mulled_build_files.py
galaxy/tool_util/deps/mulled/mulled_build_tool.py
galaxy/tool_util/deps/mulled/mulled_hash.py
galaxy/tool_util/deps/mulled/mulled_list.py
galaxy/tool_util/deps/mulled/mulled_search.py
galaxy/tool_util/deps/mulled/mulled_update_singularity_containers.py
galaxy/tool_util/deps/mulled/util.py
galaxy/tool_util/deps/resolvers/__init__.py
galaxy/tool_util/deps/resolvers/brewed_tool_shed_packages.py
galaxy/tool_util/deps/resolvers/conda.py
galaxy/tool_util/deps/resolvers/default_conda_mapping.yml
galaxy/tool_util/deps/resolvers/galaxy_packages.py
galaxy/tool_util/deps/resolvers/homebrew.py
galaxy/tool_util/deps/resolvers/lmod.py
galaxy/tool_util/deps/resolvers/modules.py
galaxy/tool_util/deps/resolvers/resolver_mixins.py
galaxy/tool_util/deps/resolvers/tool_shed_packages.py
galaxy/tool_util/deps/resolvers/unlinked_tool_shed_packages.py
galaxy/tool_util/linters/__init__.py
galaxy/tool_util/linters/_util.py
galaxy/tool_util/linters/citations.py
galaxy/tool_util/linters/command.py
galaxy/tool_util/linters/cwl.py
galaxy/tool_util/linters/datatypes.py
galaxy/tool_util/linters/datatypes_conf.xml.sample
galaxy/tool_util/linters/general.py
galaxy/tool_util/linters/help.py
galaxy/tool_util/linters/inputs.py
galaxy/tool_util/linters/output.py
galaxy/tool_util/linters/required_files.py
galaxy/tool_util/linters/stdio.py
galaxy/tool_util/linters/tests.py
galaxy/tool_util/linters/xml_order.py
galaxy/tool_util/linters/xsd.py
galaxy/tool_util/locations/__init__.py
galaxy/tool_util/locations/dockstore.py
galaxy/tool_util/locations/file.py
galaxy/tool_util/locations/http.py
galaxy/tool_util/ontologies/__init__.py
galaxy/tool_util/ontologies/biotools_mappings.tsv
galaxy/tool_util/ontologies/edam_operation_mappings.tsv
galaxy/tool_util/ontologies/edam_topic_mappings.tsv
galaxy/tool_util/ontologies/ontology_data.py
galaxy/tool_util/parameters/__init__.py
galaxy/tool_util/parameters/case.py
galaxy/tool_util/parameters/convert.py
galaxy/tool_util/parameters/factory.py
galaxy/tool_util/parameters/json.py
galaxy/tool_util/parameters/model_validation.py
galaxy/tool_util/parameters/state.py
galaxy/tool_util/parameters/visitor.py
galaxy/tool_util/parameters/scripts/__init__.py
galaxy/tool_util/parameters/scripts/validate_test_cases.py
galaxy/tool_util/parser/__init__.py
galaxy/tool_util/parser/cwl.py
galaxy/tool_util/parser/factory.py
galaxy/tool_util/parser/interface.py
galaxy/tool_util/parser/output_actions.py
galaxy/tool_util/parser/output_collection_def.py
galaxy/tool_util/parser/output_objects.py
galaxy/tool_util/parser/parameter_validators.py
galaxy/tool_util/parser/stdio.py
galaxy/tool_util/parser/util.py
galaxy/tool_util/parser/xml.py
galaxy/tool_util/parser/yaml.py
galaxy/tool_util/toolbox/__init__.py
galaxy/tool_util/toolbox/base.py
galaxy/tool_util/toolbox/integrated_panel.py
galaxy/tool_util/toolbox/panel.py
galaxy/tool_util/toolbox/parser.py
galaxy/tool_util/toolbox/watcher.py
galaxy/tool_util/toolbox/filters/__init__.py
galaxy/tool_util/toolbox/filters/examples.py.sample
galaxy/tool_util/toolbox/lineages/__init__.py
galaxy/tool_util/toolbox/lineages/factory.py
galaxy/tool_util/toolbox/lineages/interface.py
galaxy/tool_util/toolbox/views/__init__.py
galaxy/tool_util/toolbox/views/definitions.py
galaxy/tool_util/toolbox/views/edam.py
galaxy/tool_util/toolbox/views/interface.py
galaxy/tool_util/toolbox/views/sources.py
galaxy/tool_util/toolbox/views/static.py
galaxy/tool_util/unittest_utils/__init__.py
galaxy/tool_util/unittest_utils/interactor.py
galaxy/tool_util/unittest_utils/parameters.py
galaxy/tool_util/unittest_utils/sample_data.py
galaxy/tool_util/upgrade/__init__.py
galaxy/tool_util/upgrade/script.py
galaxy/tool_util/upgrade/upgrade_codes.json
galaxy/tool_util/verify/__init__.py
galaxy/tool_util/verify/_types.py
galaxy/tool_util/verify/codegen.py
galaxy/tool_util/verify/interactor.py
galaxy/tool_util/verify/parse.py
galaxy/tool_util/verify/script.py
galaxy/tool_util/verify/test_config.sample.yml
galaxy/tool_util/verify/test_data.py
galaxy/tool_util/verify/wait.py
galaxy/tool_util/verify/asserts/__init__.py
galaxy/tool_util/verify/asserts/_types.py
galaxy/tool_util/verify/asserts/_util.py
galaxy/tool_util/verify/asserts/archive.py
galaxy/tool_util/verify/asserts/hdf5.py
galaxy/tool_util/verify/asserts/image.py
galaxy/tool_util/verify/asserts/json.py
galaxy/tool_util/verify/asserts/size.py
galaxy/tool_util/verify/asserts/tabular.py
galaxy/tool_util/verify/asserts/text.py
galaxy/tool_util/verify/asserts/xml.py
galaxy/tool_util/xsd/LICENSE
galaxy/tool_util/xsd/README.md
galaxy/tool_util/xsd/galaxy.jxb
galaxy/tool_util/xsd/galaxy.xsd
galaxy_tool_util.egg-info/PKG-INFO
galaxy_tool_util.egg-info/SOURCES.txt
galaxy_tool_util.egg-info/dependency_links.txt
galaxy_tool_util.egg-info/requires.txt
galaxy_tool_util.egg-info/top_level.txt